CFP last date
20 May 2024
Reseach Article

Automation of DNA Finger Printing for Precise Pattern Identification using Neural-fuzzy Mapping approach

by A. Pushpalatha, B. Mukunthan
International Journal of Computer Applications
Foundation of Computer Science (FCS), NY, USA
Volume 13 - Number 3
Year of Publication: 2011
Authors: A. Pushpalatha, B. Mukunthan
10.5120/1761-2411

A. Pushpalatha, B. Mukunthan . Automation of DNA Finger Printing for Precise Pattern Identification using Neural-fuzzy Mapping approach. International Journal of Computer Applications. 13, 3 ( January 2011), 16-24. DOI=10.5120/1761-2411

@article{ 10.5120/1761-2411,
author = { A. Pushpalatha, B. Mukunthan },
title = { Automation of DNA Finger Printing for Precise Pattern Identification using Neural-fuzzy Mapping approach },
journal = { International Journal of Computer Applications },
issue_date = { January 2011 },
volume = { 13 },
number = { 3 },
month = { January },
year = { 2011 },
issn = { 0975-8887 },
pages = { 16-24 },
numpages = {9},
url = { https://ijcaonline.org/archives/volume13/number3/1761-2411/ },
doi = { 10.5120/1761-2411 },
publisher = {Foundation of Computer Science (FCS), NY, USA},
address = {New York, USA}
}
%0 Journal Article
%1 2024-02-06T20:01:47.929319+05:30
%A A. Pushpalatha
%A B. Mukunthan
%T Automation of DNA Finger Printing for Precise Pattern Identification using Neural-fuzzy Mapping approach
%J International Journal of Computer Applications
%@ 0975-8887
%V 13
%N 3
%P 16-24
%D 2011
%I Foundation of Computer Science (FCS), NY, USA
Abstract

The conventional techniques and algorithms employed by forensic scientists to assist in the identification of individuals on the basis of their respective Deoxyribonucleic acid base(DNA) pair profiles involves more computational steps and mathematical formulas that leads to more complexity. DNA identification is not considered by many as a biometric recognition technology, mainly because it is not yet an automated process i.e. it takes more time to analyze the DNA finger prints and samples collected from the crime scene, it will be considered as a future biometric trait if it’s suitably automated. Neural networks learn by examples so that it can be trained with known examples of a problem to gain knowledge about it so the neural network can be effective to solve unknown or untrained instances of the problem if it is aptly trained. The perfect blend made of bioinformatics, neural networks and fuzzy logic results in efficient algorithms of pattern analysis techniques that induce automation which is inevitable in DNA profiling that became manually impractical with the growing amount of data.

References
  1. Carpenter, G.A. and S. Gross berg, and David B. Rosen, “ARTMAP: Supervised Real-time Learning and Classification of Non-stationary Data by a Self-organizing Neural Network”, Neural Networks, Vol 4, pp.565-588.
  2. Schalkoff, Robert (1992), “Pattern Recognition- Statistical, Structural and Neural Approaches”, John Wiley & Sons.Timothy, J. Ross (1997), “Fuzzy Logic with Engineering Applications”, McGraw Hill, 1997.
  3. Freeman,J.A. & D.M.Skapura(1991), “Neural Networks”, Addison Wesley.
  4. Carpenter, G.A. and S. Gross berg, Natalya Markuzon, J.H. Reynolds, and D.B.Rosen(1992), FuzzyARTMAP: “A Neural Network Architecture for Incremental Supervised Learning of Analog Multi-dimensional Maps”, IEEE Trans on Neural Networks, 1992, Vol 3, No. 5 pp. 698-713.
  5. kasubam,Tom (1993), “Simplified Fuzzy ARTMAP, AI Expert” , November, pp. 18-25 and Pao, Y.H.(1989), “Adaptive Pattern Recognition Neural Networks”, Addision Wesley, M.A.
  6. Baxevanis, A.D. and Ouellette, B.F.F., eds., “Bioinformatics: a Practical Guide to the Analysis of Genes and Proteins”, third edition. Wiley2005.
  7. AchuthsankarS Nair Computational Biology & Bioinformatics - A gentle Overview. “Communications of Computer Society of India”, January 2007 and Pevzner, Pavel A. “Computational Molecular Biology: An Algorithmic Approach” The MIT Press, 2000.Zhang, Z.,Cheung, K.H. and Townsend, J.P.Bringing Web2.0 to bioinformatics.
  8. Hogeweg, P. and B. Hesper B. (1984) “The alignment of sets of sequences and the construction of phyletic trees: an integrated method”. J Mol Evol 20: 175-186.
  9. Saenger, Wolfram (1984). “Principles of Nucleic Acid Structure” New York: Springer-Verlag. Butler, John M (2001) “Forensic DNA Typing” Elsevier. pp. 14–15. Pearson H 2006. "Genetics: what is a gene?” pp.398–401.
  10. Wolfsberg T, McEntyre J, Schuler G (2001). “Guide to the draft human genome”. Nature 409 (6822): 824–6.and “Designation of the two strands of DNA” JCBN/NC-IUB Newsletter 1989, Accessed 07 May 2008.
  11. Nature Archives Double Helix of DNA: 50 Years effreys A, Wilson V, Thein S (1985). “Individual-specific 'fingerprints' of human DNA”.
  12. Effreys A.J., Wilson V., Thein S.W 1984. “Hyper variable minisatellite regions in human DNA” Nature 314: 67-73
  13. Joseph Wambaugh “The Blooding” New York: A Perigord Press Book, 1989, 202, Rose & Goos.
  14. "DNA - A Practical Guide" (Carswell Publications, Toronto) and Bhattacharya, Shaoni (20 April 2004). “Killer convicted thanks to relative's DNA".
  15. Min JouW, HaegemanG, Ysebaert M, Fiers W May 1972 “Nucleotide sequence of the gene coding for the bacteriophage MS2 coat protein”. Fiers W, Contreras R,Duerinck F, (April 1976).
  16. “Complete nucleotide sequence of bacteriophage MS2 RNA: primary and secondary structure of the replicase gene”.Gilbert, W. “DNA Sequencing and Gene Structure”. Nobel lecture, 8 December 1980 and Sanger F. “Determination of nucleotide sequences in DNA”. Nobel lecture, 8 December 1980.
  17. Lipman, DJ, Pearson, WR (1985) “Rapid and sensitive protein similarity searches”. Science 227 (4693): 1435–41 and Pearson, WR; Lipman, DJ (1988) “Improved tool for Biological Sequence Comparison”. Proceedings of the National Academy of Sciences of the United States of America 85 (8):2444–8.
  18. Wong, P.M., I.J. Taggart, and T.D. Gedeon(1995), “The Use of Fuzzy ARTMAP for ithofacies Classification: Comparison Study”, Proc. Of SPWLA, Thirty sixth Annual Logging Symposium, Paris.
  19. Barbara Moore “ART1 and Pattern clustering” In David Toruretzky, Geoffery Hinton, and Terrence Sejnowski, editors, Proceedings of the 1988 Connectionist Models Summer School, pages 174-185.
Index Terms

Computer Science
Information Sciences

Keywords

Competitive Learning DNA Profiling Adaptive Resonance Theory Simplified Fuzzy ARTMAP Input Generator DNA Sequence Format Input Preprocessor Input Separator Deviator.