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Reseach Article

Study and Analysis of Microarray Denoising using Systholic Boolean Orthonormalizer Network in Wavelet Domain

Published on May 2012 by Vishakha P. S., Supriya S. T.
National Conference on Advancement in Electronics & Telecommunication Engineering
Foundation of Computer Science USA
NCAETE - Number 1
May 2012
Authors: Vishakha P. S., Supriya S. T.
e5a78c8c-c144-4fc6-ad4a-f9d7def8f595

Vishakha P. S., Supriya S. T. . Study and Analysis of Microarray Denoising using Systholic Boolean Orthonormalizer Network in Wavelet Domain. National Conference on Advancement in Electronics & Telecommunication Engineering. NCAETE, 1 (May 2012), 18-23.

@article{
author = { Vishakha P. S., Supriya S. T. },
title = { Study and Analysis of Microarray Denoising using Systholic Boolean Orthonormalizer Network in Wavelet Domain },
journal = { National Conference on Advancement in Electronics & Telecommunication Engineering },
issue_date = { May 2012 },
volume = { NCAETE },
number = { 1 },
month = { May },
year = { 2012 },
issn = 0975-8887,
pages = { 18-23 },
numpages = 6,
url = { /proceedings/ncaete/number1/6590-1080/ },
publisher = {Foundation of Computer Science (FCS), NY, USA},
address = {New York, USA}
}
%0 Proceeding Article
%1 National Conference on Advancement in Electronics & Telecommunication Engineering
%A Vishakha P. S.
%A Supriya S. T.
%T Study and Analysis of Microarray Denoising using Systholic Boolean Orthonormalizer Network in Wavelet Domain
%J National Conference on Advancement in Electronics & Telecommunication Engineering
%@ 0975-8887
%V NCAETE
%N 1
%P 18-23
%D 2012
%I International Journal of Computer Applications
Abstract

In this paper, we present a new approach to deal with the noise inherent in the microarray image processing procedure. The method is based on the following procedure: We apply 1) Bidimentional Discrete Wavelet Transform (DWT-2D) to the Noisy Microarray, 2) scaling and rounding to the coefficients of the highest subbands (to obtain integer and positive coefficients), 3) bit-slicing to the new highest subbands (to obtain bit-planes), 4) then we apply the Systholic Boolean Orthonormalizer Network (SBON) to the input bit-plane set and we obtain two orthonormal otput bit-plane sets (in a Boolean sense), we project a set on the other one, by means of an AND operation, and then, 5) we apply re-assembling, and, 6) rescaling. Finally, 7) we apply Inverse DWT-2D and reconstruct a microarray from the modified wavelet coefficients. Denoising results compare favorably to the most of methods in use at the moment.

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Index Terms

Computer Science
Information Sciences

Keywords

Systholic Boolean Orthonormalizer Network Microarray Denoising Dwt Sbon