CFP last date
20 May 2024
Reseach Article

A Fuzzy-C-Means Approach for Tissue Volume Estimation in Brain MRI Images

Published on February 2014 by Basavaraj S. Anami, Prakash H. Unki
National Conference on Recent Advances in Information Technology
Foundation of Computer Science USA
NCRAIT - Number 3
February 2014
Authors: Basavaraj S. Anami, Prakash H. Unki
b02e5d05-89c9-4d1f-b6af-f0b563e41bc0

Basavaraj S. Anami, Prakash H. Unki . A Fuzzy-C-Means Approach for Tissue Volume Estimation in Brain MRI Images. National Conference on Recent Advances in Information Technology. NCRAIT, 3 (February 2014), 21-24.

@article{
author = { Basavaraj S. Anami, Prakash H. Unki },
title = { A Fuzzy-C-Means Approach for Tissue Volume Estimation in Brain MRI Images },
journal = { National Conference on Recent Advances in Information Technology },
issue_date = { February 2014 },
volume = { NCRAIT },
number = { 3 },
month = { February },
year = { 2014 },
issn = 0975-8887,
pages = { 21-24 },
numpages = 4,
url = { /proceedings/ncrait/number3/15155-1422/ },
publisher = {Foundation of Computer Science (FCS), NY, USA},
address = {New York, USA}
}
%0 Proceeding Article
%1 National Conference on Recent Advances in Information Technology
%A Basavaraj S. Anami
%A Prakash H. Unki
%T A Fuzzy-C-Means Approach for Tissue Volume Estimation in Brain MRI Images
%J National Conference on Recent Advances in Information Technology
%@ 0975-8887
%V NCRAIT
%N 3
%P 21-24
%D 2014
%I International Journal of Computer Applications
Abstract

The paper presents a method for automatic segmentation and calculation of tissue volume in brain MRI images. This is essential for radiologists since different diseases alter the tissue volume. Since the boundaries are complex, Modified Fuzzy C means (MFCM) is used to segment brain MRI image into three tissues namely white matter (WM), grey matter (GM) and cerebrospinal fluid (CSF). The MFCM segmentation results obtained are input to the level set methodology for refinement of results. We have used the methodology on 100 different brain MRI images of both male and female. The percentage of WM, GM and CSF calculation is done using pixel counting method. The results indicate that there is no much difference in the tissue volumes of male and female. This method can be used to estimate the tissue volume in different diseases and in different age groups.

References
  1. Bricq S. , Collet Ch. , and Armspach J. P. , (2008), Unifying framework for multimodal brain MRI segmentation based on Hidden Markov Chains, Medical Image Analysis, 12, 6, 639-652.
  2. Cai W. , Chen S. , and Zhang D. , (2007), Fast and robust fuzzy c-means clustering algorithms incorporating local information for image segmentation, Pattern Recognition, 40, 825–838.
  3. Chen C. , Ozolek J. A. , Wang W. , Rohde G. K. , (2011), A pixel classification system for segmenting biomedical images using intensity neighborhoods and dimension reduction, IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 1649-1652.
  4. Chuang K. , Tzeng H. , Chen S. , Wu J. , and Chen T. , (2006), Fuzzy c-means clustering with spatial information for image segmentation, Computerized Medical Imaging and Graphics, 30, 1, 9-15.
  5. Ciptadi, A. , Chen C. , Zagorodnov, V. , (2009), Component analysis approach to estimation of tissue intensity distributions of 3D images, IEEE 12th International Conference on Computer Vision, 1765-1770.
  6. Clark M. C. , (1994), Segmenting MRI Volumes of the Brain With Knowledge- Based Clustering, MS Thesis, Department of Computer Science and Engineering, University of South Florida,.
  7. Forouzanfar M. , Forghani N. , and Teshnehlab M. , (2010), Parameter optimization of improved fuzzy c-means clustering algorithm for brain MR image segmentation, Engineering Applications of Artificial Intelligence, 23, 2, 160-168.
  8. Lei W. K. , Li B. N. , Dong M. C. , and Vai M. I. , (2007), AFC-ECG: an adaptive fuzzy ECG classi?er, Proceedings of the 11th World Congress on Soft Computing in Industrial Applications (WSC11), Advances in Soft Computing, 189–199.
  9. Lowry, N. , Mangoubi, R. , Desai, M. , Marzouk, Y. , and Sammak, P. , (2011), A unified approach to expectation-maximization and level set segmentation applied to stem cell and brain MRI images, IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 1446-1450.
  10. Mancas M. , Gosselin B. , and Macq B. , (2005), Segmentation Using a Region Growing Thresholding, Proc. of the Electronic Imaging Conference of the International Society for Optical Imaging (SPIE/EI 2005), USA.
  11. Masroor M. A. and Mohammad D. B. , (2008), Segmentation of Brain MR Images for Tumor Extraction by Combining K-means Clustering and Perona-Malik Anisotropic Diffusion Model, International Journal of Image Processing, 2,1, 27-34,.
  12. Osher S. , Fedkiw R. , Level Set Methods and Dynamic Implicit Surfaces, Springer-Verlag, New York, 2003.
  13. Seixas F. L. , Damasceno J. , Da Silva M. P. , de Souza A. S. , and Saade D. C. M. (2007), Automatic Segmentation of Brain Structures Based on Anatomic Atlas, Seventh International Conference on Intelligent Systems Design and Applications,. 329-334.
  14. Sethian J. A. , Level Set Methods and Fast Marching Methods, Cambridge: Cambridge, University Press, New York, 1999.
  15. Song T. , Jamshidi M. M. , Lee R. R. , and Huang M. , (2007), A Modified Probabilistic Neural Network for Partial Volume Segmentation in Brain MR Image, IEEE Transactions on Neural Networks, 18, 5, 1424-1432.
  16. Wells, W. M. , Grimson, W. E. L. , Kikinis, R. and Jolesz F. A. , (1996),Adaptive segmentation of MRI data, IEEE Transactions on Medical Imaging, 15, 4, 429-442.
  17. Cremers D. , (2003), A multiphase levelset framework for variational motion segmentation, in Proc. Scale Space Meth. Comput. Vis. , 599–614.
Index Terms

Computer Science
Information Sciences

Keywords

Brain Mri Fuzzy Logic Level Set Tissue Segmentation Volume